Foundation Model Hidden Representations for Heart Rate Estimation from Auscultation
AuthorsJingping Nie†‡, Tien Dung Tran, Karan Thakkar§‡, Vasudha Kowtha, Jon Huang, Carlos Avendano, Erdin Azemi, Vikramjit Mitra
Foundation Model Hidden Representations for Heart Rate Estimation from Auscultation
AuthorsJingping Nie†‡, Tien Dung Tran, Karan Thakkar§‡, Vasudha Kowtha, Jon Huang, Carlos Avendano, Erdin Azemi, Vikramjit Mitra
Auscultation, particularly heart sound, is a non-invasive technique that provides essential vital sign information. Recently, self-supervised acoustic representation founda- tion models (FMs) have been proposed to offer insights into acoustics-based vital signs. However, there has been little exploration of the extent to which auscultation is encoded in these pre-trained FM representations. In this work, using a publicly available phonocardioram (PCG) dataset and a heart rate (HR) estimation model, we con- duct a layer-wise investigation of six acoustic representa- tion FMs: HuBERT, wav2vec2, wavLM, Whisper, Con- trastive Language-Audio Pretraining (CLAP), and an in- house CLAP model. Additionally, we implement the baseline method from [1] (which relies on acoustic fea- tures), and show that overall, representation vectors from pre-trained foundation models (FMs) offer comparable performance to the baseline. Notably, HR estimation using the representations from the audio encoder of the in-house CLAP model outperforms the results obtained from the baseline, achieving a lower mean absolute error (MAE) across various train/validation/test splits despite the domain mismatch.
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Flow models parameterized as time-dependent velocity fields can generate data from noise by integrating an ODE. These models are often trained using flow matching, i.e. by sampling random pairs of noise and target points and ensuring that the velocity field is aligned, on average, with when evaluated along a segment linking to . While these pairs are sampled…
Model-Driven Heart Rate Estimation and Heart Murmur Detection Based on Phonocardiogram
August 1, 2024research area Data Science and Annotation, research area Health
This paper has been accepted at IEEE International Workshop on Machine Learning for Signal Process (MLSP) 2024.
Acoustic signals are crucial for health monitoring, particularly heart sounds which provide essential data like heart rate and detect cardiac anomalies such as murmurs. This study utilizes a publicly available phonocardiogram (PCG) dataset to estimate heart rate using model-driven methods and extends the best-performing model to a…